Recruiting
Phase 2

HSIL Treatment

Sponsor:

UCLA

Code:

NCT06949800

Conditions

HSIL, High Grade Squamous Intraepithelial Lesion

HPV-Related Squamous Cell Carcinoma

Anal HSIL

Eligibility Criteria

Sex: All

Age: 21+

Healthy Volunteers: Not accepted

Interventions

EXE-346 Probiotic

Placebo

Usual Care High Resolution Anoscopy (HRA)

Study Details

Brief summary:

This study is focused on treatment of anal high-grade squamous intraepithelial lesions (HSIL) in persons with HIV (PWH), with the ultimate goal of applying the approach toward prevention of anal cancer in this population

Conditions

HSIL, High Grade Squamous Intraepithelial Lesion

HPV-Related Squamous Cell Carcinoma

Anal HSIL

Study ID

NCT06949800

Start date

Sep 4, 2026

Status verified date

Sep, 2026

Completion date

Jul 31, 2027

Anticipated

Primary completion date

May 31, 2027

Anticipated

Eligibility Criteria

Eligibility Criteria

Sex: All

Age: 21+

Healthy Volunteers: Not accepted

Inclusion Criteria:

1. Signed informed consent
2. Participant in ULACNet-101 or participant screened specifically for ULACNet-102.
3. Biopsy-proven anal HSIL (men or women) shown as part of participation in the ULACNet-101 study or at a screening visit for ULACNet-102.
4. At least one focus of anal HSIL must be large enough to be monitored for response, i.e.,not completely removed after the screening biopsy.
5. Total volume of HSIL is less than 50% of the anal canal or perianal region.
6. Must be actively on treatment with effective antiretroviral therapy (ART) regimen for at least three months preceding enrollment (Visit 1, Day 1) in ULACNet-101 or at screening for ULACNet-102.
7. HIV RNA <200 copies/ml at baseline.
8. Cluster of differentiation 4 (CD4) nadir above 200 cells per microliter (uL)
9. Eastern Cooperative Oncology Group (ECOG) performance status <=1 (Karnofsky >= 70%).
10. Participants must meet the following laboratory parameters within 3 months before enrollment:

1. Leukocytes: ≥3,000/mm\^3.
2. Absolute neutrophil count: ≥1,500/mm\^3.
3. Platelets: ≥100,000/mm\^3.
4. Elevation of aspartate aminotransferase (AST), alanine aminotransferase (ALT), or bilirubin <2 times the upper limit of normal.
11. Not pregnant or breast feeding and one of the following:

1. Of non-childbearing potential (i.e. persons aged 60 years or older or who have had a hysterectomy or tubal ligation or are postmenopausal, as defined by no menses for at least 12 months and without an alternative medical cause).
2. Persons aged less than 60 years of childbearing potential and agree to practice highly effective contraception from initiation of taking EXE-346 or placebo through 14 days after taking the last dose of EXE-346 or placebo. Highly effective methods of contraception include one or more of the following:

i.Male partner who is sterile (medically effective vasectomy) prior to the female participant's entry into the study and is the sole sexual partner for the female participant.

ii.Hormonal (oral, intravaginal, transdermal, implantable or injectable); Progestogen-only hormonal contraceptives without inhibition of ovulation are not considered to be highly effective.

iii. An intrauterine hormone-releasing system. iv. An intrauterine device. v. Bilateral tubal occlusion or removal. vi. Sexual abstinence, only if the participant refrains from heterosexual intercourse from initiation taking EXE-346 or placebo through 14 days after taking the last dose of EXE-346 or placebo and it is the usual lifestyle of the participant.

Exclusion Criteria:

1. History of any anogenital cancer.
2. Presence of untreated cervical HSIL or cervical cancer.
3. Anal HSIL on clinical examination or biopsy that clinicians are concerned for cancer.
4. Receipt of chemotherapy, radiotherapy or immunosuppressive medication in three months preceding enrollment in ULACNet-101 or at the screening visit for ULACNet-102.
5. Immunosuppression as a result of underlying illness or treatment including:

1. Use of high dose corticosteroids (>10 mg/day prednisone or equivalent) for >=7 days (inhaled, otic, topical and ophthalmic corticosteroids are permitted).
2. Primary immune deficiency disease.
3. Use of synthetic or biologic disease-modifying anti-rheumatic drugs.
4. History of bone marrow or solid organ transplant.
5. History of any other clinically significant autoimmune or immunosuppressive disease.
6. Participant initiated a new treatment with antibiotics within the 2 weeks prior to screening or plans to start antibiotic therapy during the study period.
7. Participant is taking NSAIDs as a long-term treatment (ie, consistent use for at least 4 days/week each month). Acute use of NSAIDs is allowed.
8. Participant has known hypersensitivity to EXE-346 or any product components.
9. Current known infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).
10. Warts so extensive that they preclude the clinician from determining the extent and location of HSIL.
11. Sustained, manually confirmed, sitting systolic blood pressure >150 mm Hg or <90 mm Hg or a diastolic blood pressure >95 mm Hg as measured by 3 readings taken 15 minutes apart at screening or Visit 1.
12. History of significant thrombocytopenia, history of thrombosis with thrombocytopenia (TTS) syndrome or heparin-induced thrombocytopenia.
13. Uncontrolled intercurrent illness including, but not limited to, ongoing or active infection, cardiac arrhythmia, or psychiatric illness/social situations that, in the opinion of the investigator, would limit compliance with study requirements.
14. Participant has participated in any clinical study of an approved or unapproved investigational medicinal product within the 30 days prior to screening.
15. Any other finding that, in the opinion of the Investigator deems the participant unsuitable for the study

Study Design

Enrollment

90 participants

Anticipated

Allocation

Randomized

Intervention Model

Parallel Assignment

Primary purpose

Treatment

Interventions and Outcome Measures

Arms

experimental: Blinded: EXE-346 probiotic

Participants will be blinded and stratified on gender and according to hrHPV status (HPV16 present or absent in baseline swab). After confirmation of biopsy-proven HSIL, participants will receive sachets of EXE-346 or placebo, with the contents suspended in water and consumed orally twice per day for 3 months (12 weeks) with follow-up visits at 24 and 36 weeks. Participants will undergo High resolution anoscopy (HRA) as a safety check at Visit 3 (12 weeks) and at Visit 4 (24 weeks) to ensure HRA has not progressed to cancer. Biopsies will only be performed if there is any concern for progression. Participants with active HSIL at week 36 will be treated with non-investigational, standard of care, hyfrecation as soon as possible, but within 8 weeks.

placebo comparator: Blinded: Placebo

Participants will be blinded and stratified on gender and according to hrHPV status (HPV16 present or absent in baseline swab). After confirmation of biopsy-proven HSIL, participants will receive sachets of EXE-346 or placebo, with the contents suspended in water and consumed orally twice per day for 3 months (12 weeks) with follow-up visits at 24 and 36 weeks. Participants will undergo High resolution anoscopy (HRA) as a safety check at Visit 3 (12 weeks) and at Visit 4 (24 weeks) to ensure HRA has not progressed to cancer. Biopsies will only be performed if there is any concern for progression. Participants with active HSIL at week 36 will be treated with non-investigational, standard of care, hyfrecation as soon as possible, but within 8 weeks.

Interventions

EXE-346 Probiotic

Given as a single-dose, powder packet to mix with water

Placebo

Given as a single-dose, powder packet to mix with water

Usual Care High Resolution Anoscopy (HRA)

Non-investigational HRA will be performed

Primary outcome measure

  • Proportion of participants with no disease present [ Time Frame: Up to 36 weeks ]
  • Proportion of participants reporting treatment-emergent adverse events [ Time Frame: Up to 36 weeks ]

Central Contacts and Locations

Locations

University of California, San Francisco

Recruiting

San Francisco, California, United States, 94143

Contacts

More Information

Sponsor

University of California, San Francisco

Last update posted

Sep 9, 2026

Last verified

Sep, 2026

Keywords

  • HIV
  • Anal intraepithelial neoplasia (AIN) 3
  • p16+ AIN 2

Trial information was received from ClinicalTrials.gov and was last updated on 2026-09-10. This information was provided to ClinicalTrials.gov by University of California, San Francisco on 2026-09-09.